phenylacetylglutamine to x-24531

Numerator Metabolite

Structure of phenylacetylglutamine
Metabolite Accession: GCST90199768
Name: phenylacetylglutamine
Hmdb Id: HMDB0006344
Super Pathway: NA
Sub Pathway: NA
Inchikey: JFLIEFSWGNOPJJ

Denominator Metabolite

Metabolite Accession: GCST90200637
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs2328895

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
6
Beta (Ratio):
-0.202
Position:
25802083
SE (Ratio):
0.014
Effect Allele:
C
Z-score (Ratio):
-14.752
Reference Allele:
T
-log10(P):
-111.728
MAF:
0.445
Beta (Num):
-0.003
Novel Locus:
No
SE (Num):
0.015
Beta (Den):
0.199
SE (Den):
0.017
No CNV overlap
rQTL cluster:
111
Reaction Distance:
NA
Closest Genes:
SLC17A1 SLC17A4 SLC17A3 HIST1H2BA HIST1H2AA

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data