androstenediol (3beta,17beta) monosulfate (2) to x-21364

Numerator Metabolite

Structure of androstenediol (3beta,17beta) monosulfate (2)
Metabolite Accession: GCST90199871
Name: androstenediol (3beta,17beta) monosulfate (2)
Hmdb Id: HMDB0240429,HMDB0186954
Super Pathway: NA
Sub Pathway: NA
Inchikey: KMTOEENORMWLCF

Denominator Metabolite

Metabolite Accession: GCST90200566
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs2900478

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Clumped rQTL variant

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SNP Summary

Chr:
12
Beta (Ratio):
-0.193
Position:
21368797
SE (Ratio):
0.019
Effect Allele:
A
Z-score (Ratio):
-10.315
Reference Allele:
T
-log10(P):
-55.772
MAF:
0.165
Beta (Num):
-0.113
Novel Locus:
Yes ✔️
SE (Num):
0.020
Beta (Den):
0.080
SE (Den):
0.020
No CNV overlap
rQTL cluster:
52
Reaction Distance:
NA
Closest Genes:
SLCO1B1 RP11-125O5.2 SLCO1A2 SLCO1B7 LST3

Region: rs148982377

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
7
Beta (Ratio):
-0.475
Position:
99075038
SE (Ratio):
0.038
Effect Allele:
C
Z-score (Ratio):
-12.410
Reference Allele:
T
-log10(P):
-79.758
MAF:
0.034
Beta (Num):
-0.347
Novel Locus:
No
SE (Num):
0.041
Beta (Den):
0.128
SE (Den):
0.040
No CNV overlap
rQTL cluster:
90
Reaction Distance:
NA
Closest Genes:
ZNF789 ZNF394 ATP5J2 ATP5J2-PTCD1 PTCD1

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data