4-oxo-retinoic acid to x-24588

Numerator Metabolite

Metabolite Accession: GCST90199894
Name: 4-oxo-retinoic acid
Hmdb Id: HMDB0006285
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200649
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs72551330

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
2
Beta (Ratio):
0.890
Position:
234580678
SE (Ratio):
0.092
Effect Allele:
C
Z-score (Ratio):
9.680
Reference Allele:
T
-log10(P):
-49.355
MAF:
0.015
Beta (Num):
0.497
Novel Locus:
No
SE (Num):
0.066
Beta (Den):
-0.393
SE (Den):
0.062
No CNV overlap
rQTL cluster:
136
Reaction Distance:
NA
Closest Genes:
UGT1A10 UGT1A8 UGT1A9 UGT1A7 UGT1A6

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data