histidine betaine (hercynine)* to x-10458

Numerator Metabolite

Structure of histidine betaine (hercynine)*
Metabolite Accession: GCST90199927
Name: histidine betaine (hercynine)*
Hmdb Id: HMDB0029422
Super Pathway: NA
Sub Pathway: NA
Inchikey: GPPYTCRVKHULJH

Denominator Metabolite

Metabolite Accession: GCST90200461
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs4148324

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
2
Beta (Ratio):
0.307
Position:
234672722
SE (Ratio):
0.024
Effect Allele:
G
Z-score (Ratio):
12.964
Reference Allele:
T
-log10(P):
-86.822
MAF:
0.327
Beta (Num):
0.114
Novel Locus:
No
SE (Num):
0.017
Beta (Den):
-0.193
SE (Den):
0.017
No CNV overlap
rQTL cluster:
138
Reaction Distance:
NA
Closest Genes:
UGT1A10 UGT1A3 UGT1A5 UGT1A8 UGT1A1

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data