3-methoxycatechol sulfate (1) to x-17685

Numerator Metabolite

Structure of 3-methoxycatechol sulfate (1)
Metabolite Accession: GCST90200009
Name: 3-methoxycatechol sulfate (1)
Hmdb Id: HMDB0242163
Super Pathway: NA
Sub Pathway: NA
Inchikey: KWNPSWVOZWAPLW

Denominator Metabolite

Metabolite Accession: GCST90200557
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs143647521

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

Loading Ratio Plot...

Loading Numerator Plot...

Loading Denominator Plot...

SNP Summary

Chr:
16
Beta (Ratio):
-0.519
Position:
28555161
SE (Ratio):
0.061
Effect Allele:
T
Z-score (Ratio):
-8.499
Reference Allele:
C
-log10(P):
-38.492
MAF:
0.010
Beta (Num):
-0.262
Novel Locus:
Yes ✔️
SE (Num):
0.078
Beta (Den):
0.257
SE (Den):
0.081
No CNV overlap
rQTL cluster:
176
Reaction Distance:
NA
Closest Genes:
NUPR1 CCDC101 IL27 APOBR SULT1A2

Region: rs1165196

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

Loading Ratio Plot...

Loading Numerator Plot...

Loading Denominator Plot...

SNP Summary

Chr:
6
Beta (Ratio):
-0.116
Position:
25813150
SE (Ratio):
0.012
Effect Allele:
G
Z-score (Ratio):
-9.431
Reference Allele:
A
-log10(P):
-46.952
MAF:
0.444
Beta (Num):
-0.024
Novel Locus:
Yes ✔️
SE (Num):
0.016
Beta (Den):
0.092
SE (Den):
0.016
No CNV overlap
rQTL cluster:
111
Reaction Distance:
NA
Closest Genes:
SLC17A1 SLC17A3 SLC17A4 HIST1H2BA HIST1H2AA

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data