n,n,n-trimethyl-5-aminovalerate to x-11381

Numerator Metabolite

Structure of n,n,n-trimethyl-5-aminovalerate
Metabolite Accession: GCST90200147
Name: n,n,n-trimethyl-5-aminovalerate
Hmdb Id: HMDB0240732
Super Pathway: NA
Sub Pathway: NA
Inchikey: CDLVFVFTRQPQFU

Denominator Metabolite

Metabolite Accession: GCST90200471
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs12208357

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
6
Beta (Ratio):
0.499
Position:
160543148
SE (Ratio):
0.037
Effect Allele:
T
Z-score (Ratio):
13.330
Reference Allele:
C
-log10(P):
-91.661
MAF:
0.069
Beta (Num):
0.174
Novel Locus:
No
SE (Num):
0.029
Beta (Den):
-0.325
SE (Den):
0.030
No CNV overlap
rQTL cluster:
98
Reaction Distance:
NA
Closest Genes:
SLC22A1 IGF2R SLC22A2 MAS1 SLC22A3

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data