3-carboxy-4-methyl-5-pentyl-2-furanpropionate (3-cmpfp)** to x-24588

Numerator Metabolite

Structure of 3-carboxy-4-methyl-5-pentyl-2-furanpropionate (3-cmpfp)**
Metabolite Accession: GCST90200172
Name: 3-carboxy-4-methyl-5-pentyl-2-furanpropionate (3-cmpfp)**
Hmdb Id: HMDB0061643
Super Pathway: NA
Sub Pathway: NA
Inchikey: RIJDKRLRDVBUHJ

Denominator Metabolite

Metabolite Accession: GCST90200649
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs112997117

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

Loading Ratio Plot...

Loading Numerator Plot...

Loading Denominator Plot...

SNP Summary

Chr:
10
Beta (Ratio):
0.553
Position:
101619779
SE (Ratio):
0.041
Effect Allele:
C
Z-score (Ratio):
13.467
Reference Allele:
T
-log10(P):
-93.518
MAF:
0.060
Beta (Num):
0.210
Novel Locus:
No
SE (Num):
0.032
Beta (Den):
-0.343
SE (Den):
0.031
No CNV overlap
rQTL cluster:
68
Reaction Distance:
NA
Closest Genes:
ABCC2 DNMBP CUTC COX15 ENTPD7

Region: rs72551330

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

Loading Ratio Plot...

Loading Numerator Plot...

Loading Denominator Plot...

SNP Summary

Chr:
2
Beta (Ratio):
1.011
Position:
234580678
SE (Ratio):
0.081
Effect Allele:
C
Z-score (Ratio):
12.450
Reference Allele:
T
-log10(P):
-80.251
MAF:
0.015
Beta (Num):
0.618
Novel Locus:
No
SE (Num):
0.063
Beta (Den):
-0.393
SE (Den):
0.062
No CNV overlap
rQTL cluster:
136
Reaction Distance:
NA
Closest Genes:
UGT1A10 UGT1A8 UGT1A9 UGT1A7 UGT1A6

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data