4-methylhexanoylglutamine to decadienedioic acid (c10:2-dc)**

Numerator Metabolite

Metabolite Accession: GCST90200223
Name: 4-methylhexanoylglutamine
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Structure of decadienedioic acid (c10:2-dc)**
Metabolite Accession: GCST90200700
Name: decadienedioic acid (c10:2-dc)**
Hmdb Id: HMDB0242172
Super Pathway: NA
Sub Pathway: NA
Inchikey: FRWVXIATCBRYHA

Associated Genomic Regions

Region: rs2328895

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
6
Beta (Ratio):
-0.265
Position:
25802083
SE (Ratio):
0.021
Effect Allele:
C
Z-score (Ratio):
-12.536
Reference Allele:
T
-log10(P):
-81.334
MAF:
0.430
Beta (Num):
-0.101
Novel Locus:
No
SE (Num):
0.019
Beta (Den):
0.164
SE (Den):
0.015
No CNV overlap
rQTL cluster:
111
Reaction Distance:
NA
Closest Genes:
SLC17A1 SLC17A4 SLC17A3 HIST1H2BA HIST1H2AA

LLM Analysis

Numerator Metabolite Explanation:

Glutamine metabolism, Fatty acid metabolism.4[1]

Denominator Metabolite Explanation:

Fatty acid omega-oxidation.5[1]

Ratio Explanation:

This ratio may reflect altered transport activity by SLC17A4, affecting the balance of a glutamine conjugate and a dicarboxylic acid.

Ratio Evidence:

metabolites related through biology

Gene Ratio Phenotype Relationship:

The SLC17A4 missense variant likely alters its transport of uric acid, leading to changes in serum urate and creatinine, which are primary phenotypes.2[1], 6[2] The ratio is likely a secondary effect of this altered transporter function impacting hematological traits.7[3], 8[4]

Phenotype Driver:

Gene-centric:SLC17A4

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data