n-succinyl-phenylalanine to x-15486

Numerator Metabolite

Structure of n-succinyl-phenylalanine
Metabolite Accession: GCST90200262
Name: n-succinyl-phenylalanine
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: CWAGPBPLOYGROC

Denominator Metabolite

Metabolite Accession: GCST90200533
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs1177442

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
6
Beta (Ratio):
0.547
Position:
25809069
SE (Ratio):
0.023
Effect Allele:
A
Z-score (Ratio):
23.937
Reference Allele:
G
-log10(P):
-289.881
MAF:
0.466
Beta (Num):
0.364
Novel Locus:
No
SE (Num):
0.017
Beta (Den):
-0.183
SE (Den):
0.015
No CNV overlap
rQTL cluster:
111
Reaction Distance:
NA
Closest Genes:
SLC17A1 SLC17A3 SLC17A4 HIST1H2BA HIST1H2AA

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data