cys-gly, oxidized to x-13684

Numerator Metabolite

Structure of cys-gly, oxidized
Metabolite Accession: GCST90200319
Name: cys-gly, oxidized
Hmdb Id: HMDB0000078
Super Pathway: NA
Sub Pathway: NA
Inchikey: KDJVKDYFFTWHBO

Denominator Metabolite

Metabolite Accession: GCST90200512
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs2062541

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
16
Beta (Ratio):
-0.329
Position:
16127235
SE (Ratio):
0.022
Effect Allele:
G
Z-score (Ratio):
-14.692
Reference Allele:
A
-log10(P):
-110.851
MAF:
0.390
Beta (Num):
-0.205
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
0.124
SE (Den):
0.015
No CNV overlap
rQTL cluster:
33
Reaction Distance:
NA
Closest Genes:
ABCC1 ABCC6 FOPNL MYH11 NOMO3

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data