x-11308 to x-11880

Numerator Metabolite

Metabolite Accession: GCST90200456
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200487
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs1358894

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
10
Beta (Ratio):
0.359
Position:
96681133
SE (Ratio):
0.023
Effect Allele:
A
Z-score (Ratio):
15.527
Reference Allele:
G
-log10(P):
-123.516
MAF:
0.064
Beta (Num):
0.343
Novel Locus:
No
SE (Num):
0.030
Beta (Den):
-0.016
SE (Den):
0.031
No CNV overlap
rQTL cluster:
72
Reaction Distance:
NA
Closest Genes:
CYP2C9 CYP2C19 CYP2C8 CYP2C18 C10orf129

Region: rs10873259

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
14
Beta (Ratio):
0.128
Position:
74056804
SE (Ratio):
0.012
Effect Allele:
G
Z-score (Ratio):
10.655
Reference Allele:
A
-log10(P):
-59.368
MAF:
0.339
Beta (Num):
0.084
Novel Locus:
Yes ✔️
SE (Num):
0.016
Beta (Den):
-0.044
SE (Den):
0.016
No CNV overlap
rQTL cluster:
43
Reaction Distance:
NA
Closest Genes:
ACOT4 ACOT2 ACOT6 HEATR4 ACOT1

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data