x-11308 to x-24951

Numerator Metabolite

Metabolite Accession: GCST90200456
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200643
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs10873259

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
14
Beta (Ratio):
0.119
Position:
74056804
SE (Ratio):
0.013
Effect Allele:
G
Z-score (Ratio):
9.125
Reference Allele:
A
-log10(P):
-44.082
MAF:
0.339
Beta (Num):
0.084
Novel Locus:
Yes ✔️
SE (Num):
0.016
Beta (Den):
-0.035
SE (Den):
0.016
No CNV overlap
rQTL cluster:
43
Reaction Distance:
NA
Closest Genes:
ACOT4 ACOT2 ACOT6 HEATR4 ACOT1

Region: rs4076073

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
17
Beta (Ratio):
-0.112
Position:
73912522
SE (Ratio):
0.013
Effect Allele:
G
Z-score (Ratio):
-8.723
Reference Allele:
A
-log10(P):
-40.445
MAF:
0.346
Beta (Num):
-0.070
Novel Locus:
Yes ✔️
SE (Num):
0.015
Beta (Den):
0.042
SE (Den):
0.016
No CNV overlap
rQTL cluster:
16
Reaction Distance:
NA
Closest Genes:
RP11-552F3.12 FBF1 MRPL38 TRIM65 ACOX1

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data