x-11483 to x-26111

Numerator Metabolite

Metabolite Accession: GCST90200469
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200670
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs73079476

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
12
Beta (Ratio):
-0.270
Position:
21343833
SE (Ratio):
0.015
Effect Allele:
C
Z-score (Ratio):
-17.470
Reference Allele:
A
-log10(P):
-155.690
MAF:
0.157
Beta (Num):
0.035
Novel Locus:
No
SE (Num):
0.022
Beta (Den):
0.305
SE (Den):
0.021
No CNV overlap
rQTL cluster:
52
Reaction Distance:
NA
Closest Genes:
SLCO1B1 RP11-125O5.2 SLCO1A2 SLCO1B7 LST3

Region: rs11932131

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
4
Beta (Ratio):
0.108
Position:
69949547
SE (Ratio):
0.011
Effect Allele:
T
Z-score (Ratio):
9.503
Reference Allele:
G
-log10(P):
-47.640
MAF:
0.460
Beta (Num):
-0.010
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
-0.119
SE (Den):
0.016
No CNV overlap
rQTL cluster:
122
Reaction Distance:
NA
Closest Genes:
UGT2B7 UGT2B11 UGT2A3 UGT2B28 UGT2B10

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data