x-12007 to x-12714

Numerator Metabolite

Metabolite Accession: GCST90200494
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200496
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs151228

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
16
Beta (Ratio):
0.259
Position:
28563026
SE (Ratio):
0.018
Effect Allele:
A
Z-score (Ratio):
14.673
Reference Allele:
G
-log10(P):
-110.567
MAF:
0.472
Beta (Num):
0.042
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
-0.218
SE (Den):
0.017
No CNV overlap
rQTL cluster:
27
Reaction Distance:
NA
Closest Genes:
CCDC101 NUPR1 IL27 SULT1A2 APOBR

Region: rs1531022

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
4
Beta (Ratio):
-0.142
Position:
69532128
SE (Ratio):
0.018
Effect Allele:
A
Z-score (Ratio):
-7.925
Reference Allele:
G
-log10(P):
-33.713
MAF:
0.469
Beta (Num):
-0.088
Novel Locus:
Yes ✔️
SE (Num):
0.016
Beta (Den):
0.054
SE (Den):
0.017
No CNV overlap
rQTL cluster:
123
Reaction Distance:
NA
Closest Genes:
UGT2B15 UGT2B17 UGT2B10 TMPRSS11E UGT2A3

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data