x-12822 to x-24588

Numerator Metabolite

Metabolite Accession: GCST90200507
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200649
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs72838138

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
10
Beta (Ratio):
0.494
Position:
101607901
SE (Ratio):
0.036
Effect Allele:
A
Z-score (Ratio):
13.778
Reference Allele:
G
-log10(P):
-97.770
MAF:
0.060
Beta (Num):
0.150
Novel Locus:
No
SE (Num):
0.032
Beta (Den):
-0.344
SE (Den):
0.031
No CNV overlap
rQTL cluster:
68
Reaction Distance:
NA
Closest Genes:
ABCC2 DNMBP CUTC COX15 ENTPD7

Region: rs72551330

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
2
Beta (Ratio):
0.666
Position:
234580678
SE (Ratio):
0.071
Effect Allele:
C
Z-score (Ratio):
9.384
Reference Allele:
T
-log10(P):
-46.504
MAF:
0.015
Beta (Num):
0.273
Novel Locus:
Yes ✔️
SE (Num):
0.063
Beta (Den):
-0.393
SE (Den):
0.062
No CNV overlap
rQTL cluster:
136
Reaction Distance:
NA
Closest Genes:
UGT1A10 UGT1A8 UGT1A9 UGT1A7 UGT1A6

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data