x-17357 to x-12844

Numerator Metabolite

Metabolite Accession: GCST90200550
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200523
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs11555762

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
11
Beta (Ratio):
-0.319
Position:
43876698
SE (Ratio):
0.013
Effect Allele:
T
Z-score (Ratio):
-24.354
Reference Allele:
C
-log10(P):
-299.967
MAF:
0.303
Beta (Num):
-0.252
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
0.067
SE (Den):
0.017
No CNV overlap
rQTL cluster:
63
Reaction Distance:
NA
Closest Genes:
HSD17B12 ALKBH3 C11orf96 ACCSL ACCS

Region: rs1569342

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
4
Beta (Ratio):
0.186
Position:
70341550
SE (Ratio):
0.014
Effect Allele:
A
Z-score (Ratio):
13.087
Reference Allele:
G
-log10(P):
-88.441
MAF:
0.247
Beta (Num):
0.015
Novel Locus:
No
SE (Num):
0.018
Beta (Den):
-0.171
SE (Den):
0.018
No CNV overlap
rQTL cluster:
121
Reaction Distance:
NA
Closest Genes:
UGT2B4 UGT2A1 UGT2A2 UGT2A1 UGT2B28

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data