x-17653 to x-16935

Numerator Metabolite

Metabolite Accession: GCST90200553
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200532
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs62004868

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
14
Beta (Ratio):
0.527
Position:
74076621
SE (Ratio):
0.020
Effect Allele:
A
Z-score (Ratio):
26.161
Reference Allele:
G
-log10(P):
-345.687
MAF:
0.205
Beta (Num):
0.178
Novel Locus:
No
SE (Num):
0.019
Beta (Den):
-0.350
SE (Den):
0.019
No CNV overlap
rQTL cluster:
43
Reaction Distance:
NA
Closest Genes:
ACOT6 ACOT4 ACOT2 DNAL1 HEATR4

Region: rs73357523

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
17
Beta (Ratio):
0.278
Position:
73968923
SE (Ratio):
0.036
Effect Allele:
T
Z-score (Ratio):
7.692
Reference Allele:
C
-log10(P):
-31.867
MAF:
0.052
Beta (Num):
0.158
Novel Locus:
Yes ✔️
SE (Num):
0.035
Beta (Den):
-0.120
SE (Den):
0.035
No CNV overlap
rQTL cluster:
15
Reaction Distance:
NA
Closest Genes:
ACOX1 TEN1 CDK3 EVPL FBF1

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data