x-18888 to 4-hydroxyphenylacetylglutamine

Numerator Metabolite

Metabolite Accession: GCST90200558
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Structure of 4-hydroxyphenylacetylglutamine
Metabolite Accession: GCST90200106
Name: 4-hydroxyphenylacetylglutamine
Hmdb Id: HMDB0006061
Super Pathway: NA
Sub Pathway: NA
Inchikey: CYRKYXZJUIBBJX

Associated Genomic Regions

Region: rs28415528

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
1
Beta (Ratio):
-0.206
Position:
151879761
SE (Ratio):
0.023
Effect Allele:
A
Z-score (Ratio):
-8.922
Reference Allele:
G
-log10(P):
-42.230
MAF:
0.313
Beta (Num):
-0.120
Novel Locus:
No
SE (Num):
0.017
Beta (Den):
0.086
SE (Den):
0.016
No CNV overlap
rQTL cluster:
155
Reaction Distance:
NA
Closest Genes:
THEM4 THEM5 C2CD4D RORC S100A10

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data