x-21339 to x-11308

Numerator Metabolite

Metabolite Accession: GCST90200571
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200456
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs9332214

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
10
Beta (Ratio):
-0.332
Position:
96743108
SE (Ratio):
0.022
Effect Allele:
C
Z-score (Ratio):
-15.068
Reference Allele:
T
-log10(P):
-116.460
MAF:
0.064
Beta (Num):
0.008
Novel Locus:
No
SE (Num):
0.031
Beta (Den):
0.340
SE (Den):
0.030
No CNV overlap
rQTL cluster:
72
Reaction Distance:
NA
Closest Genes:
CYP2C9 CYP2C8 CYP2C19 C10orf129 CYP2C18

Region: rs61988865

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
14
Beta (Ratio):
-0.141
Position:
74068430
SE (Ratio):
0.013
Effect Allele:
A
Z-score (Ratio):
-10.449
Reference Allele:
C
-log10(P):
-57.170
MAF:
0.205
Beta (Num):
-0.036
Novel Locus:
Yes ✔️
SE (Num):
0.019
Beta (Den):
0.105
SE (Den):
0.018
No CNV overlap
rQTL cluster:
43
Reaction Distance:
NA
Closest Genes:
ACOT4 ACOT6 ACOT2 HEATR4 DNAL1

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data