x-21441 to x-21470

Numerator Metabolite

Metabolite Accession: GCST90200581
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200590
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs4149056

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
12
Beta (Ratio):
-0.278
Position:
21331549
SE (Ratio):
0.022
Effect Allele:
C
Z-score (Ratio):
-12.902
Reference Allele:
T
-log10(P):
-86.024
MAF:
0.156
Beta (Num):
-0.049
Novel Locus:
No
SE (Num):
0.021
Beta (Den):
0.229
SE (Den):
0.021
No CNV overlap
rQTL cluster:
52
Reaction Distance:
NA
Closest Genes:
SLCO1B1 RP11-125O5.2 SLCO1B7 SLCO1A2 LST3

Region: rs4478248

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
4
Beta (Ratio):
0.124
Position:
69947216
SE (Ratio):
0.016
Effect Allele:
G
Z-score (Ratio):
7.730
Reference Allele:
A
-log10(P):
-32.160
MAF:
0.463
Beta (Num):
0.078
Novel Locus:
Yes ✔️
SE (Num):
0.016
Beta (Den):
-0.046
SE (Den):
0.016
No CNV overlap
rQTL cluster:
122
Reaction Distance:
NA
Closest Genes:
UGT2B7 UGT2B11 UGT2A3 UGT2B28 UGT2B10

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data