x-21829 to x-18886

Numerator Metabolite

Metabolite Accession: GCST90200585
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200551
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs12132488

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
1
Beta (Ratio):
0.140
Position:
47389613
SE (Ratio):
0.014
Effect Allele:
T
Z-score (Ratio):
9.906
Reference Allele:
C
-log10(P):
-51.595
MAF:
0.128
Beta (Num):
0.158
Novel Locus:
No
SE (Num):
0.023
Beta (Den):
0.018
SE (Den):
0.023
No CNV overlap
rQTL cluster:
163
Reaction Distance:
NA
Closest Genes:
CYP4A11 CYP4X1 CYP4B1 CYP4Z1 EFCAB14

Region: rs1061810

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
11
Beta (Ratio):
-0.097
Position:
43877934
SE (Ratio):
0.010
Effect Allele:
A
Z-score (Ratio):
-9.587
Reference Allele:
C
-log10(P):
-48.451
MAF:
0.291
Beta (Num):
0.005
Novel Locus:
Yes ✔️
SE (Num):
0.017
Beta (Den):
0.102
SE (Den):
0.017
No CNV overlap
rQTL cluster:
63
Reaction Distance:
NA
Closest Genes:
HSD17B12 ALKBH3 C11orf96 ACCSL ACCS

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data