x-21829 to x-18888

Numerator Metabolite

Metabolite Accession: GCST90200585
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200558
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs11211408

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
1
Beta (Ratio):
0.291
Position:
47416270
SE (Ratio):
0.028
Effect Allele:
A
Z-score (Ratio):
10.339
Reference Allele:
G
-log10(P):
-56.013
MAF:
0.115
Beta (Num):
0.171
Novel Locus:
No
SE (Num):
0.024
Beta (Den):
-0.120
SE (Den):
0.026
No CNV overlap
rQTL cluster:
163
Reaction Distance:
NA
Closest Genes:
CYP4A11 CYP4X1 CYP4Z1 CYP4B1 CYP4A22

Region: rs28415528

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
1
Beta (Ratio):
0.182
Position:
151879761
SE (Ratio):
0.019
Effect Allele:
A
Z-score (Ratio):
9.553
Reference Allele:
G
-log10(P):
-48.127
MAF:
0.318
Beta (Num):
0.062
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
-0.120
SE (Den):
0.017
No CNV overlap
rQTL cluster:
155
Reaction Distance:
NA
Closest Genes:
THEM4 THEM5 C2CD4D RORC S100A10

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data