n-acetylthreonine to x-24795

Numerator Metabolite

Structure of n-acetylthreonine
Metabolite Accession: GCST90199726
Name: n-acetylthreonine
Hmdb Id: HMDB0062557
Super Pathway: NA
Sub Pathway: NA
Inchikey: PEDXUVCGOLSNLQ

Denominator Metabolite

Metabolite Accession: GCST90200642
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs1047891

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
2
Beta (Ratio):
-0.255
Position:
211540507
SE (Ratio):
0.027
Effect Allele:
A
Z-score (Ratio):
-9.613
Reference Allele:
C
-log10(P):
-48.701
MAF:
0.309
Beta (Num):
-0.087
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
0.168
SE (Den):
0.022
No CNV overlap
rQTL cluster:
140
Reaction Distance:
NA
Closest Genes:
CPS1 LANCL1 MYL1 ACADL KANSL1L

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data