1-ribosyl-imidazoleacetate* to x-25422

Numerator Metabolite

Structure of 1-ribosyl-imidazoleacetate*
Metabolite Accession: GCST90199815
Name: 1-ribosyl-imidazoleacetate*
Hmdb Id: HMDB0002331
Super Pathway: NA
Sub Pathway: NA
Inchikey: AHPWEWASPTZMEK

Denominator Metabolite

Metabolite Accession: GCST90200661
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs1047891

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
2
Beta (Ratio):
-0.172
Position:
211540507
SE (Ratio):
0.019
Effect Allele:
A
Z-score (Ratio):
-8.845
Reference Allele:
C
-log10(P):
-41.534
MAF:
0.310
Beta (Num):
-0.087
Novel Locus:
Yes ✔️
SE (Num):
0.015
Beta (Den):
0.085
SE (Den):
0.016
No CNV overlap
rQTL cluster:
140
Reaction Distance:
NA
Closest Genes:
CPS1 LANCL1 MYL1 ACADL KANSL1L

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data