(2 or 3)-decenoate (10:1n7 or n8) to x-21353

Numerator Metabolite

Metabolite Accession: GCST90200263
Name: (2 or 3)-decenoate (10:1n7 or n8)
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Denominator Metabolite

Metabolite Accession: GCST90200567
Name: NA
Hmdb Id: NA
Super Pathway: NA
Sub Pathway: NA
Inchikey: NA

Associated Genomic Regions

Region: rs28415528

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Clumped rQTL variant

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SNP Summary

Chr:
1
Beta (Ratio):
0.198
Position:
151879761
SE (Ratio):
0.010
Effect Allele:
A
Z-score (Ratio):
20.548
Reference Allele:
G
-log10(P):
-214.360
MAF:
0.318
Beta (Num):
-0.023
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
-0.220
SE (Den):
0.016
No CNV overlap
rQTL cluster:
155
Reaction Distance:
NA
Closest Genes:
THEM4 THEM5 C2CD4D RORC S100A10

Region: rs151154986

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Clumped rQTL variant

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SNP Summary

Chr:
14
Beta (Ratio):
-0.387
Position:
74040136
SE (Ratio):
0.026
Effect Allele:
A
Z-score (Ratio):
-14.685
Reference Allele:
G
-log10(P):
-110.736
MAF:
0.029
Beta (Num):
-0.345
Novel Locus:
No
SE (Num):
0.044
Beta (Den):
0.042
SE (Den):
0.044
No CNV overlap
rQTL cluster:
44
Reaction Distance:
NA
Closest Genes:
ACOT2 HEATR4 ACOT4 ACOT1 ACOT6

Region: rs620484

Click a 'Plot' button in the tables to the right to view a locus plot here.

Clumped rQTL variant

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SNP Summary

Chr:
6
Beta (Ratio):
0.156
Position:
4114211
SE (Ratio):
0.010
Effect Allele:
A
Z-score (Ratio):
16.169
Reference Allele:
G
-log10(P):
-133.728
MAF:
0.316
Beta (Num):
0.156
Novel Locus:
No
SE (Num):
0.016
Beta (Den):
4.98e-04
SE (Den):
0.016
No CNV overlap
rQTL cluster:
113
Reaction Distance:
NA
Closest Genes:
C6orf201 ECI2 FAM217A PRPF4B C6ORF50

LLM Analysis

Not available.

Downloads

Download the full rQTL summary statistics file for this metabolite ratio. Data contains the loci listed here. For each SNP (chromosome, effect_allele, reference_allele, pos_name, position) these columns contain the summary statistics of the ratio (beta, pgain, pval, se, z), the numerator metabolite (beta_1, pval_1, n_iids_1, effect_allele_frequency_1, se_1, z_1) and the denominator metabolite (beta_2, pval_2, n_iids_2, effect_allele_frequency_2, se_2, z_2)

Download rQTL Data